scTIE

scTIE (single-cell Temporal Integration and inference of multimodal Experiments) is an autoencoder-based method for integrating multimodal profiling of scRNA-seq and scATAC-seq data over a time course and inferring cell-type specific GRNs. scTIE projects cells from all time points into a common embedding space, followed by extracting interpretable information from this space to predict cell trajectories.

homepage: https://github.com/SydneyBioX/scTIE

version	versionsuffix	toolchain
20231205	-CUDA-12.1.1	foss/2023a

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