SAMtools¶
SAM Tools provide various utilities for manipulating alignments in the SAM format, including sorting, merging, indexing and generating alignments in a per-position format.
homepage: http://www.htslib.org/
| version | versionsuffix | toolchain |
|---|---|---|
0.1.17 |
intel/2017a |
|
0.1.19 |
GCC/10.3.0 |
|
0.1.19 |
foss/2016a |
|
0.1.19 |
foss/2016b |
|
0.1.20 |
GCC/12.3.0 |
|
0.1.20 |
GCC/8.3.0 |
|
0.1.20 |
foss/2018b |
|
0.1.20 |
intel/2017a |
|
0.1.20 |
intel/2017b |
|
0.1.20 |
intel/2018a |
|
0.1.20 |
intel/2018b |
|
0.1.20 |
intel/2019b |
|
1.10 |
GCC/8.2.0-2.31.1 |
|
1.10 |
GCC/8.3.0 |
|
1.10 |
GCC/9.3.0 |
|
1.10 |
iccifort/2019.5.281 |
|
1.11 |
GCC/10.2.0 |
|
1.11 |
GCC/9.3.0 |
|
1.11 |
iccifort/2020.4.304 |
|
1.12 |
GCC/10.2.0 |
|
1.12 |
GCC/10.3.0 |
|
1.12 |
GCC/9.3.0 |
|
1.13 |
GCC/10.3.0 |
|
1.13 |
GCC/11.3.0 |
|
1.13 |
GCC/12.3.0 |
|
1.14 |
GCC/11.2.0 |
|
1.15 |
GCC/11.2.0 |
|
1.15.1 |
GCC/11.2.0 |
|
1.15.1 |
GCC/11.3.0 |
|
1.16.1 |
GCC/11.2.0 |
|
1.16.1 |
GCC/11.3.0 |
|
1.17 |
GCC/12.2.0 |
|
1.18 |
GCC/12.3.0 |
|
1.19.2 |
GCC/13.2.0 |
|
1.2 |
foss/2016b |
|
1.3 |
foss/2016a |
|
1.3 |
intel/2016a |
|
1.3.1 |
foss/2016a |
|
1.3.1 |
foss/2016b |
|
1.3.1 |
intel/2016a |
|
1.3.1 |
-HTSlib-1.3.2 |
intel/2016b |
1.3.1 |
intel/2016b |
|
1.4 |
foss/2016b |
|
1.4 |
intel/2016b |
|
1.4 |
intel/2017a |
|
1.4.1 |
intel/2017a |
|
1.5 |
foss/2016b |
|
1.5 |
intel/2017a |
|
1.6 |
GCC/6.4.0-2.28 |
|
1.6 |
foss/2017a |
|
1.6 |
iccifort/2017.4.196-GCC-6.4.0-2.28 |
|
1.6 |
intel/2017b |
|
1.7 |
foss/2018a |
|
1.7 |
intel/2018a |
|
1.8 |
intel/2018a |
|
1.9 |
GCC/6.4.0-2.28 |
|
1.9 |
GCC/7.3.0-2.30 |
|
1.9 |
GCC/8.2.0-2.31.1 |
|
1.9 |
foss/2018b |
|
1.9 |
iccifort/2019.1.144-GCC-8.2.0-2.31.1 |
|
1.9 |
intel/2018b |
(quick links: (all) - 0 - a - b - c - d - e - f - g - h - i - j - k - l - m - n - o - p - q - r - s - t - u - v - w - x - y - z)