List of supported software (s)¶
(quick links: (all) - 0 - a - b - c - d - e - f - g - h - i - j - k - l - m - n - o - p - q - r - s - t - u - v - w - x - y - z)
- S-Lang
- s3fs
- S4
- Sabre
- safestringlib
- Safetensors
- SAGE
- Sagemath
- Sailfish
- SALib
- Salmon
- SALMON-TDDFT
- Sambamba
- samblaster
- Samcef
- samclip
- samplot
- SAMtools
- sansa
- SAP
- SAS
- Satsuma2
- savvy
- Saxon-HE
- SBCL
- sbt
- ScaFaCoS
- ScaLAPACK
- Scalasca
- SCALCE
- Scalene
- scanpy
- scArches
- scCODA
- scCustomize
- sceasy
- SCENIC
- SCENICplus
- scFEA
- scGeneFit
- SCGid
- scGSVA
- scHiCExplorer
- Schrodinger
- scib
- scib-metrics
- sciClone
- ScientificPython
- scikit-allel
- scikit-bio
- scikit-build
- scikit-build-core
- scikit-cuda
- scikit-extremes
- scikit-image
- scikit-learn
- scikit-lego
- scikit-misc
- scikit-multilearn
- scikit-optimize
- scikit-plot
- scikit-uplift
- SCIP
- SCIPhI
- scipy
- SciPy-bundle
- SciTools-Iris
- SCnorm
- Scoary
- SCons
- SCOOP
- SCopeLoomR
- Score-P
- SCOTCH
- scp
- scPred
- Scrappie
- SCReadCounts
- scrublet
- scVelo
- scvi-tools
- Scythe
- SDCC
- SDL
- SDL2
- SDL2_gfx
- SDL2_image
- SDL2_mixer
- SDL2_ttf
- SDL_image
- SDSL
- sdsl-lite
- Seaborn
- SEACells
- SearchGUI
- SeaView
- SECAPR
- Seeder
- segemehl
- segment-anything
- segmentation-models
- segmentation-models-pytorch
- SeisSol
- SelEstim
- SELFIES
- SemiBin
- semla
- Sentence-Transformers
- SentencePiece
- sentinelsat
- sep
- SEPP
- Seq-Gen
- seq2HLA
- SeqAn
- SeqAn3
- SeqKit
- SeqLib
- Seqmagick
- SeqPrep
- seqtk
- Serf
- setuptools
- setuptools-rust
- Seurat
- SeuratData
- SeuratDisk
- SeuratWrappers
- sf
- sfftk
- Shannon
- SHAP
- shapAAR
- SHAPEIT
- SHAPEIT4
- Shapely
- SharedMeatAxe
- sharutils
- Shasta
- ShengBTE
- shift
- SHORE
- Short-Pair
- shovill
- shrinkwrap
- SHTns
- Sibelia
- SICER2
- sickle
- Siesta
- SignalP
- silhouetteRank
- silx
- simanneal
- simint
- SimNIBS
- SimPEG
- SIMPLE
- Simple-DFTD3
- SimpleElastix
- SimpleITK
- simpy
- Simstrat
- SimVascular
- Single-cell-python-bundle
- SingleM
- Singular
- sinto
- SiNVICT
- SIONlib
- SIP
- SIRIUS
- sirocco
- siscone
- SISSO
- SISSO++
- SKA2
- SKESA
- sketchmap
- skewer
- sklearn-pandas
- sklearn-som
- skorch
- sktime
- SlamDunk
- SLATEC
- SLEPc
- slepc4py
- sleuth
- slidingwindow
- SLiM
- slow5tools
- slurm-drmaa
- smafa
- smallgenomeutilities
- SMAP
- SMARTdenovo
- SMC++
- smfishHmrf
- smithwaterman
- Smoldyn
- smooth-topk
- SMRT-Link
- SMV
- snakemake
- SNAP
- SNAP-ESA
- SNAP-ESA-python
- SNAP-HMM
- SNAPE-pooled
- snaphu
- snappy
- Sniffles
- snippy
- snp-sites
- snpEff
- SNPhylo
- SNPomatic
- SOAPaligner
- SOAPdenovo-Trans
- SOAPdenovo2
- SOAPfuse
- socat
- SOCI
- SolexaQA++
- solo
- sonic
- SoPlex
- SoQt
- SortMeRNA
- SoupX
- SoX
- SoXt
- SpaceRanger
- Spack
- spaCy
- SPAdes
- spaln
- Spark
- sparse-neighbors-search
- sparsehash
- SpatialDE
- spatialreg
- spdlog
- SpectrA
- spectral.methods
- speech_tools
- SPEI
- spektral
- SpFFT
- spglib
- spglib-python
- Sphinx
- Sphinx-RTD-Theme
- SpiceyPy
- SpiecEasi
- spla
- SplAdder
- SPLASH
- SpliceMap
- split-seq
- splitRef
- SPM
- spoa
- SPOOLES
- SPOTPY
- SPRNG
- Spyder
- SQLAlchemy
- SQLite
- SqueezeMeta
- Squidpy
- SRA-Toolkit
- sradownloader
- SRPRISM
- SRST2
- SSAHA2
- SSN
- SSPACE_Basic
- SSW
- Stable-Baselines3
- STACEY
- Stack
- Stacks
- STAMP
- StaMPS
- Stampy
- STAR
- STAR-CCM+
- STAR-Fusion
- stardist
- starparser
- stars
- Stata
- Statistics-R
- statsmodels
- STEAK
- STIR
- stpipeline
- strace
- Strainberry
- STREAM
- strelka
- StringTie
- stripy
- STRique
- Structure
- Structure_threader
- STRUMPACK
- suave
- SuAVE-biomat
- submitit
- Subread
- subset-bam
- subunit
- Subversion
- suds
- SuiteSparse
- SUMACLUST
- SUMATRA
- SUMO
- SUNDIALS
- SunPy
- SuperLU
- SuperLU_DIST
- supermagic
- supernova
- SUPPA
- SURVIVOR
- SVclone
- SVDetect
- SVDquest
- SVDSS2
- SVG
- SVIM
- svist4get
- swarm
- SWASH
- SWAT+
- swifter
- SWIG
- SWIPE
- swissknife
- SymEngine
- SymEngine-python
- SYMMETRICA
- SYMPHONY
- sympy
- synapseclient
- synthcity
- SyRI
- sysbench
- Szip
(quick links: (all) - 0 - a - b - c - d - e - f - g - h - i - j - k - l - m - n - o - p - q - r - s - t - u - v - w - x - y - z)