Pysam¶
Pysam is a python module for reading and manipulating Samfiles. It's a lightweight wrapper of the samtools C-API. Pysam also includes an interface for tabix.
homepage: https://github.com/pysam-developers/pysam
| version | versionsuffix | toolchain |
|---|---|---|
0.10.0 |
-Python-2.7.12 |
foss/2016b |
0.10.0 |
-Python-2.7.12 |
intel/2016b |
0.12.0.1 |
-Python-2.7.13 |
intel/2017a |
0.12.0.1 |
-Python-2.7.14 |
intel/2017b |
0.12.0.1 |
-Python-3.6.3 |
intel/2017b |
0.13 |
-Python-2.7.14 |
intel/2017b |
0.13.0 |
-Python-3.6.3 |
intel/2017b |
0.14 |
-Python-2.7.14 |
foss/2017b |
0.14 |
-Python-3.6.3 |
foss/2017b |
0.14 |
-Python-2.7.14 |
intel/2017b |
0.14 |
-Python-3.6.3 |
intel/2017b |
0.14 |
-Python-3.6.4 |
intel/2018a |
0.14.1 |
-Python-2.7.14 |
foss/2018a |
0.14.1 |
-Python-3.6.4 |
foss/2018a |
0.14.1 |
-Python-2.7.14 |
intel/2018a |
0.14.1 |
-Python-3.6.4 |
intel/2018a |
0.15.1 |
-Python-2.7.15 |
foss/2018b |
0.15.1 |
-Python-3.6.6 |
foss/2018b |
0.15.1 |
-Python-2.7.15 |
intel/2018b |
0.15.1 |
-Python-3.6.6 |
intel/2018b |
0.15.2 |
GCC/8.2.0-2.31.1 |
|
0.15.2 |
iccifort/2019.1.144-GCC-8.2.0-2.31.1 |
|
0.15.3 |
GCC/8.3.0 |
|
0.15.3 |
iccifort/2019.5.281 |
|
0.16.0.1 |
-Python-2.7.18 |
GCC/10.2.0 |
0.16.0.1 |
GCC/10.2.0 |
|
0.16.0.1 |
GCC/10.3.0 |
|
0.16.0.1 |
GCC/8.3.0 |
|
0.16.0.1 |
GCC/9.3.0 |
|
0.16.0.1 |
iccifort/2020.1.217 |
|
0.16.0.1 |
iccifort/2020.4.304 |
|
0.17.0 |
-Python-2.7.18 |
GCC/11.2.0 |
0.17.0 |
GCC/11.2.0 |
|
0.18.0 |
GCC/11.2.0 |
|
0.19.1 |
GCC/11.3.0 |
|
0.20.0 |
GCC/11.3.0 |
|
0.21.0 |
GCC/12.2.0 |
|
0.22.0 |
GCC/12.3.0 |
|
0.22.0 |
GCC/13.2.0 |
|
0.8.4 |
-Python-2.7.12 |
intel/2016b |
0.9.1.4 |
-Python-2.7.12 |
foss/2016b |
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