PyDamage

Pydamage, is a Python software to automate the process of contig damage identification and estimation. After modelling the ancient DNA damage using the C to T transitions, Pydamage uses a likelihood ratio test to discriminate between truly ancient, and modern contigs originating from sample contamination.

homepage: https://github.com/maxibor/pydamage

version	toolchain
0.70	foss/2021a

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