oxDNA

oxDNA is a simulation code that was initially conceived as an implementation of the coarse-grained DNA model introduced by T. E. Ouldridge, J. P. K. Doye and A. A. Louis. It has been since reworked and it is now an extensible simulation+analysis framework. It natively supports DNA, RNA, Lennard-Jones and patchy particle simulations of different kinds on both single CPU cores and NVIDIA GPUs.

homepage: https://github.com/lorenzo-rovigatti/oxDNA

version	versionsuffix	toolchain
3.5.2	-CUDA-11.7.0	foss/2022a

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