snippy¶
Snippy finds SNPs between a haploid reference genome and your NGS sequence reads. It will find both substitutions (snps) and insertions/deletions (indels). Rapid haploid variant calling and core genome alignment.
homepage: https://github.com/tseemann/snippy
| version | versionsuffix | toolchain |
|---|---|---|
4.4.1 |
-Perl-5.28.0 |
foss/2018b |
4.6.0 |
GCC/10.2.0 |
|
4.6.0 |
-Java-13-Python-3.8.2 |
GCC/9.3.0 |
4.6.0 |
-R-4.1.2 |
foss/2021b |
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