Skip to content

StringTie

StringTie is a fast and highly efficient assembler of RNA-Seq alignments into potential transcripts.

homepage: http://ccb.jhu.edu/software/stringtie/

version versionsuffix toolchain
1.3.0 intel/2016b
1.3.3 GCCcore/6.4.0
1.3.3 intel/2017a
1.3.3b foss/2016b
1.3.5 GCCcore/8.2.0
1.3.5 foss/2018b
2.0.3 GCCcore/7.3.0
2.1.0 foss/2018b
2.1.1 GCC/8.3.0
2.1.3 GCC/8.3.0
2.1.3 GCC/9.3.0
2.1.4 GCC/8.3.0
2.1.4 GCC/9.3.0
2.1.7 GCC/10.3.0
2.2.1 -Python-2.7.18 GCC/11.2.0
2.2.1 GCC/11.2.0

(quick links: (all) - 0 - a - b - c - d - e - f - g - h - i - j - k - l - m - n - o - p - q - r - s - t - u - v - w - x - y - z)