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pySCENIC

pySCENIC is a lightning-fast python implementation of the SCENIC pipeline (Single-Cell rEgulatory Network Inference and Clustering) which enables biologists to infer transcription factors, gene regulatory networks and cell types from single-cell RNA-seq data.

homepage: https://github.com/aertslab/pySCENIC

version versionsuffix toolchain
0.10.3 -Python-3.8.2 foss/2020a
0.10.3 -Python-3.8.2 intel/2020a
0.12.1-20240311 foss/2023a
0.12.1 foss/2022a

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