manta¶
Manta calls structural variants (SVs) and indels from mapped paired-end sequencing reads. It is optimized for analysis of germline variation in small sets of individuals and somatic variation in tumor/normal sample pairs. Manta discovers, assembles and scores large-scale SVs, medium-sized indels and large insertions within a single efficient workflow.
homepage: https://github.com/Illumina/manta
| version | versionsuffix | toolchain |
|---|---|---|
1.1.1 |
system |
|
1.6.0 |
-Python-2.7.18 |
GCC/10.2.0 |
1.6.0 |
-Python-2.7.16 |
gompi/2019b |
1.6.0 |
-Python-2.7.18 |
gompi/2020a |
1.6.0 |
system |
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